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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs2298059 chr6:24426959 G/T 6.22E-15 487 16.33 14.85 11.07 KM Plot
THCA rs2298060 chr6:24426822 G/A 6.11E-15 487 16.33 14.78 11.07 KM Plot
THCA rs2298061 chr6:24426820 G/C 6.11E-15 487 16.33 14.78 11.07 KM Plot
THCA rs2298635 chr11:62603047 G/T 7.55E-5 490 16.22 14.33 14.27 KM Plot
THCA rs2298636 chr11:62602983 A/G 7.55E-5 490 16.22 14.33 14.27 KM Plot
THCA rs2298967 chr4:3185747 T/C 0.000158 488 16.83 14 15.2 KM Plot
THCA rs2298969 chr4:3186244 C/T 0.000147 490 14.13 16.15 16.87 KM Plot
THCA rs2298971 chr4:3200079 A/G 8.33E-5 486 16.87 14.67 14.3 KM Plot
THCA rs2302626 chr7:30062202 A/G 8.12E-5 482 15.15 16.47 15.32 KM Plot
THCA rs2302972 chr19:11596297 C/T 1.05E-6 490 15.9 15.58 33.97 KM Plot
THCA rs2304266 chr12:109490401 C/T 6.19E-5 487 15.9 16.23 12.1 KM Plot
THCA rs2304267 chr12:109490601 C/T 6.19E-5 487 15.9 16.23 12.1 KM Plot
THCA rs2304513 chr3:100645475 G/T 2.5E-9 489 15.87 16.63 9.22 KM Plot
THCA rs2306083 chr15:41347658 C/T 0.000136 490 15.17 16.3 16.83 KM Plot
THCA rs231920 chr16:20659602 C/T 4.03E-6 489 15.9 16.4 20.68 KM Plot